Protein ZmALF13
ZmALF13 is a protein in the Alfin-like family.
Information
TF Name: ZmALF13
Species: Maize
TF Family: Alfin-like
Gene Name(Synonym): ALF13
Uniprot ID: B6TYP6
Subgenome: 1

Protein ZmALF13

ZmALF13 is a protein in the Alfin-like family.

Overview of domains present in v5 transcripts
Alfin-likePF00628PF12165
Zm00001eb145370_T004
Zm00001eb145370_T001
Zm00001eb145370_T002
Zm00001eb145370_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d042582DAPseq no logo sequence fimo position
Zm00001d042582DAPseq no logo sequence fimo position
Zm00001d042582ChIPseq no logo sequence fimo position
Zm00001d042582PChIPseq no logo sequence fimo position

Interactions where ZmALF13 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmALF13 is the target  
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There are 54 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb145370_T004 from maize genome v5

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12165
PF00628
Alfin-like
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Nucleotide Sequence
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GCCCATGAAATTCGCCGCGAGCAAA...

GRMZM2G080917_T01 from maize genome v3


Related TFome: pUT6601

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

Nucleotide Sequence
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CCAGCCTCCAGTCCACAATGGACCG...

GRMZM2G080917_T02 from maize genome v3

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEH
IKQYKCPDCTNKRVRA

Nucleotide Sequence
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CCAGCCTCCAGTCCACAATGGACCG...

GRMZM2G080917_T03 from maize genome v3

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEHI
KQYKCPDCTNKRVRA

Nucleotide Sequence
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CCAGCCTCCAGTCCACAATGGACCG...

Zm00001d042582_T001 from maize genome v4

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAE
HIKQYKCPDCTNKRVRA

Nucleotide Sequence
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CTCCTGCCCTTCCTCCAACTCCTCC...

Zm00001d042582_T002 from maize genome v4

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEH
IKQYKCPDCTNKRVRA

Nucleotide Sequence
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GTTCCCCGTTCCCTCCTCTACCACT...

Zm00001d042582_T003 from maize genome v4

Amino Acid Sequence
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MNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSKSNKPSSKV
SRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPD
CTNKRVRA

Nucleotide Sequence
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GGTTACCTTGCCAGCTGAGGAAGTG...

Zm00001eb145370_T001 from maize genome v5

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKQSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEH
IKQYKCPDCTNKRVRA

Nucleotide Sequence
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CGGGTGTACTGGATGTAATGGACAC...

Zm00001eb145370_T002 from maize genome v5

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEHI
KQYKCPDCTNKRVRA

Nucleotide Sequence
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CGGGTGTACTGGATGTAATGGACAC...

Zm00001eb145370_T003 from maize genome v5

Amino Acid Sequence
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MDGGGSGPAPNAAHTAEEVFRDYKARRAGMIKALTTDVERFFKLCDPEKENLCLYGYPDETWEVTLPAEEVPPEIPEPAL
GINFARDGMNEKDWLALVAVHSDSWLLSVAFYFGARFGFDREARRRLFSLINNMPTIFEVVTGAVKKQQAKEKTPNSSSK
SNKPSSKVSRAESRSKAKVPKDEEESGDDDGDEEAEEHDNTLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEH
IKQYKCPDCTNKRVRA

Nucleotide Sequence
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GCCCATGAAATTCGCCGCGAGCAAA...


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